STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002660010AA_permease domain-containing protein. (515 aa)    
Predicted Functional Partners:
KFL_000530390
Cation-chloride co-transporter protein.
 
     0.949
KFL_009720030
Uncharacterized protein.
 
     0.946
KFL_005900040
Putative SNF2 family N-terminal domain containing protein.
    
 0.528
KFL_000180180
Alpha-amylase.
    
  0.527
KFL_000130150
Alpha-amylase.
    
  0.527
KFL_000550350
Alpha amylase catalytic domain containing protein.
    
  0.527
KFL_000850210
Alpha amylase.
    
  0.527
KFL_000550355
Uncharacterized protein.
    
  0.527
KFL_000650300
Uncharacterized protein.
    
  0.527
KFL_001730160
Sucrose phosphorylase.
    
  0.527
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.