STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002250220Karyopherin beta 1. (873 aa)    
Predicted Functional Partners:
KFL_007200020
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.990
KFL_000660060
M3G-cap-specific nuclear import receptor.
    
 0.985
KFL_002400080
Nuclear transport receptor RANBP7/RANBP8.
   
 
 0.953
KFL_001760130
Karyopherin alpha.
   
 0.940
KFL_002210120
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.924
KFL_004670070
Importin alpha isoform.
   
 0.923
KFL_002540160
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.923
KFL_001600240
Uncharacterized protein.
   
 0.921
KFL_000980230
Uncharacterized protein.
   
 0.903
KFL_000200500
Uncharacterized protein.
   
 0.903
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
Server load: low (26%) [HD]