STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_001510300Alanine-glyoxylate aminotransferase AGT2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (489 aa)    
Predicted Functional Partners:
KFL_005820010
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.955
KFL_002440030
Alanine-glyoxylate transaminase.
  
 0.942
KFL_000760300
Carbon-nitrogen hydrolase.
  
 
 0.914
KFL_001980100
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.910
KFL_006990050
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.910
KFL_000510130
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.908
KFL_001120130
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.908
KFL_000960200
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.906
KFL_000040200
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.906
KFL_001250270
Ketose-bisphosphate aldolase class-II family protein.
  
 
 0.906
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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