STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002740120AA_TRNA_LIGASE_II domain-containing protein. (1315 aa)    
Predicted Functional Partners:
KFL_000400260
Uncharacterized protein.
   
 0.692
KFL_000640200
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
  0.652
KFL_005600010
Cyclin B and related kinase-activating proteins; Belongs to the cyclin family.
   
 0.580
KFL_000260200
Uncharacterized protein.
    
 0.572
KFL_004570080
Uncharacterized protein.
    
 0.572
KFL_003240190
Autophagy-related protein.
   
  0.562
KFL_001280050
Ubiquitin-conjugating enzyme E2 N.
    
  0.551
KFL_000660210
Regulator of spindle pole body duplication.
    
 0.526
KFL_000860350
Uncharacterized protein.
    
 0.510
KFL_001440120
Ubiquitin/40S ribosomal protein S27a fusion.
    
  0.495
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.