STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002620090DNA mismatch repair protein. (734 aa)    
Predicted Functional Partners:
KFL_003570040
DNA mismatch repair protein-MLH1 family.
  
 
 0.983
KFL_002760090
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.890
KFL_002990050
Putative MutS homolog 4.
 
 0.887
KFL_006260050
Putative MutS homolog 2; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.872
KFL_008850030
Putative MutS homolog 2.
  
 0.872
KFL_002720040
Putative MutS homolog 5.
 
 0.870
KFL_001530160
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.865
KFL_002660120
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.860
KFL_000370020
Vacuolar protein sorting-associated protein VTA1.
    
   0.816
KFL_005230050
DNA mismatch repair protein. Excinuclease ABC C subunit.
  
 0.807
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.