STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002250110Cold shock domain-containing protein. (836 aa)    
Predicted Functional Partners:
KFL_001430060
Uncharacterized protein.
    
 0.879
KFL_006570020
AP2 domain containing protein.
    
 0.879
KFL_004520080
Ras-related small GTPase.
    
 0.875
KFL_001550100
HEAT repeat protein.
    
 0.858
KFL_001090280
Protein kinase domain-containing protein.
   
 0.857
KFL_015150010
Uncharacterized protein.
   
 0.857
KFL_013860010
Protein kinase-like domain containing protein.
   
 0.857
KFL_000030370
Protein kinase superfamily protein.
    
 0.856
KFL_001570230
Uncharacterized protein.
   
 0.854
KFL_000260500
Uncharacterized protein.
   
 0.854
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.