STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002580080Vesicle-fusing ATPase. (749 aa)    
Predicted Functional Partners:
KFL_000770070
SEC1 family transport protein SLY1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.993
KFL_004210050
Alpha-soluble NSF attachment protein.
   
 0.992
KFL_004350060
Syntaxin; Belongs to the syntaxin family.
   
 0.976
KFL_002620170
Vesicle transport protein; Belongs to the synaptobrevin family.
    
 0.962
KFL_000020300
Gamma-soluble NSF attachment protein.
   
 0.953
KFL_006400070
SNAP25 homologous protein.
   
 
 0.939
KFL_003900010
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.936
KFL_002030050
Syntaxin of plants; Belongs to the syntaxin family.
    
 0.920
KFL_000710280
Vesicle transport protein.
   
 0.913
KFL_002590090
t-SNARE coiled-coil homology domain-containing protein.
    
 0.902
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.