STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_003680050tRNA methyltransferase. (347 aa)    
Predicted Functional Partners:
KFL_001810240
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 0.993
KFL_002700220
tRNA (adenine(58)-N(1))-methyltransferase.
  
 
 0.828
KFL_000640060
Uncharacterized protein.
   
    0.821
KFL_000590120
Uncharacterized protein.
   
    0.787
KFL_000910250
KH domain-containing protein.
   
    0.779
KFL_000610200
Putative DEAD-like helicases superfamily protein.
   
   0.778
KFL_000090450
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
   0.762
KFL_006910010
WD_REPEATS_REGION domain-containing protein.
   
    0.757
KFL_000470160
Brix domain-containing protein.
   
  
 0.755
KFL_000010660
Uncharacterized protein.
   
   0.750
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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