STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002950110Cytidine deaminase. (243 aa)    
Predicted Functional Partners:
KFL_000660130
Thymidine kinase; Belongs to the thymidine kinase family.
    
 0.939
KFL_000430150
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.931
KFL_004550110
Thymidylate kinase/adenylate kinase.
    
 0.913
KFL_003100040
PNP_UDP_1 domain-containing protein.
    
 0.912
KFL_001030150
CYTH domain-containing protein.
    
 0.898
KFL_011060020
Uridine kinase; Belongs to the uridine kinase family.
    
 0.898
KFL_004550070
PRK domain-containing protein.
    
  0.885
KFL_005470010
5_nucleotid_C domain-containing protein; Belongs to the 5'-nucleotidase family.
    
 0.880
KFL_006080080
NUDIX hydrolase domain containing protein; Belongs to the Nudix hydrolase family.
    
  0.879
KFL_001410040
Deoxynucleoside kinase.
    
 0.875
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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