STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_003990015J domain-containing protein. (241 aa)    
Predicted Functional Partners:
KFL_000220510
Splicing factor 3A subunit 2.
    
   0.694
KFL_001770240
C2H2 Zn-finger protein.
   
 
  0.643
KFL_001200010
FHA domain-containing protein.
   
 
 0.642
KFL_000670210
Uncharacterized protein.
   
  0.599
KFL_002150150
RNA-binding protein 25.
   
 
  0.599
KFL_000650130
Cwf21 domain-containing protein.
    
  0.590
KFL_004380070
DUF262 domain-containing protein.
    
  0.590
KFL_001640140
EF-hand domain-containing protein.
   
 
  0.539
KFL_002160010
Putative homogentisate prenyltransferase.
   
 
  0.539
KFL_003990050
Heme A farnesyltransferase.
 
      0.475
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.