STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_003490060Uncharacterized protein. (544 aa)    
Predicted Functional Partners:
KFL_009930010
SC35-like splicing factor.
  
  
  0.762
KFL_002320030
Uncharacterized protein.
   
 0.723
KFL_008260010
Ubiquitination-promoting complex protein.
   
 0.720
KFL_001790230
RNA recognition motif and CCHC-type zinc finger domains containing protein.
  
 
  0.698
KFL_003570050
Nuclear cap-binding protein subunit 2.
    
 
0.667
KFL_001930060
Uncharacterized protein.
   
 0.661
KFL_006910070
RRM superfamily protein.
   
 0.651
KFL_000060160
Uncharacterized protein.
   
  0.650
KFL_001620160
Uncharacterized protein.
   
  0.650
KFL_004360070
Transcription initiation factor TFIID subunit 15.
   
  0.650
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.