STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_004220130Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (1041 aa)    
Predicted Functional Partners:
KFL_006380020
4-alpha-glucanotransferase.
 
 
 0.973
KFL_001670090
Starch branching enzyme 4.
  
 0.924
KFL_000480180
Starch branching enzyme.
  
 0.922
KFL_008420050
Phosphoglucomutase.
  
 
 0.914
KFL_001100160
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.912
KFL_002110100
Isoamylase.
 
 0.907
KFL_000480230
Isoamylase.
 
 0.904
KFL_000630030
4-alpha-glucanotransferase.
  
 
 0.904
KFL_004390040
Isoamylase.
 
 0.904
KFL_000660320
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.880
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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