STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_003280030Pyridoxal phosphate-dependent decarboxylase. (214 aa)    
Predicted Functional Partners:
KFL_005820010
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
    
 0.931
KFL_008910050
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  0.837
KFL_003650050
Pantoate-beta-alanine ligase.
  
 
 0.779
KFL_001120130
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.732
KFL_000100390
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein.
  
 0.702
KFL_000180420
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.702
KFL_001510300
Alanine-glyoxylate aminotransferase AGT2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.702
KFL_000480380
Asparaginase.
   
 
 0.688
KFL_006480050
Uncharacterized protein.
   
 0.682
KFL_001220150
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
     
 0.679
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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