STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_002860110Putative nuclear factor Y subunit B. (197 aa)    
Predicted Functional Partners:
KFL_000610280
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.999
KFL_000520340
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 0.999
KFL_003810040
Helicase conserved C-terminal domain containing protein.
    
  0.980
KFL_001230030
DNA binding histone-like transcription factor.
    
 0.965
KFL_001500190
Putative nuclear factor Y subunit C.
    
 0.965
KFL_005910040
CCAAT-binding factor subunit C.
    
 0.965
KFL_003490050
DNA polymerase.
   
 0.936
KFL_000130370
CCAAT-binding factor.
   
 
 0.926
KFL_008100020
DNA polymerase zeta.
   
 0.902
KFL_003490090
Cell division cycle 45(CDC45)-related protein.
    
 0.897
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.