STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_003360020DOMON domain containing protein. (1083 aa)    
Predicted Functional Partners:
KFL_004950030
Uncharacterized protein.
   
   0.705
KFL_003310010
Mitochondrial ribosomal protein L23.
   
 
 0.678
KFL_007960070
Putative mitochondrial ribosomal protein L28.
   
   0.632
KFL_003990080
Mitochondrial ribosomal protein L29.
   
 
 0.601
KFL_001660115
MRP-S28 domain-containing protein.
   
   0.586
KFL_001360250
Pentatricopeptide repeat domain containing protein.
   
   0.586
KFL_001820240
L51_S25_CI-B8 domain-containing protein.
    
   0.575
KFL_000830030
Mitochondrial or chloroplast ribosomal protein L5.
   
   0.571
KFL_001880090
Chloroplast ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.551
KFL_001670120
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.551
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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