STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_003380040E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1295 aa)    
Predicted Functional Partners:
KFL_009650030
E3 ubiquitin-protein ligase.
   
 0.997
KFL_005350060
BTB/POZ domain-containing protein.
   
  
 0.918
KFL_000140340
Ubiquitin-protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.908
KFL_001990055
Uncharacterized protein.
    
 
 0.908
KFL_001990030
Protein with Ubiquitin-conjugating enzyme domain.
    
 
 0.908
KFL_001990050
Ubiquitin-conjugating enzyme.
    
 
 0.908
KFL_003420180
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.908
KFL_000210330
Ubiquitin-conjugating enzyme family protein.
   
 
 0.818
KFL_001260140
Ubiquitin conjugating enzyme family protein.
   
 
 0.818
KFL_002090040
Ubiquitin-conjugating enzyme E2-like protein.
   
 
 0.818
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.