STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_004850040Myo-inositol-1-phosphate synthase. (313 aa)    
Predicted Functional Partners:
KFL_000480140
Homogentisate 1,2-dioxygenase.
  
 
 0.876
KFL_002110110
Fumarylacetoacetase.
     
0.865
KFL_001360150
Fumarase.
  
 0.839
KFL_000510120
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.831
KFL_000030290
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.819
KFL_000510130
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.795
KFL_000040420
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.735
KFL_001120130
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.735
KFL_001680120
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.735
KFL_002020060
Aldehyde dehydrogenase family 22 member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.735
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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