STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_0049600403'-5' exonuclease domain-containing protein. (661 aa)    
Predicted Functional Partners:
KFL_006700010
WD_REPEATS_REGION domain-containing protein.
   
    0.555
KFL_001410070
Histone chaperone involved in gene silencing.
   
    0.541
KFL_001470100
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.520
KFL_005930050
Embryo sac development arrest 13.
   
    0.513
KFL_000380180
5-formyltetrahydrofolate cyclo-ligase.
   
    0.511
KFL_005770060
Structural maintenance of chromosomes protein.
   
    0.507
KFL_000170010
Ribosome biogenesis protein:Nop56p/Sik1p.
   
    0.449
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.