STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_004660050FtsH protease 4. (743 aa)    
Predicted Functional Partners:
KFL_000750160
NADH-ubiquinone 1 alpha subcomplex subunit 13-A.
   
   0.869
KFL_001160250
Uncharacterized protein.
    
   0.868
KFL_002950100
Prohibitin.
   
 0.789
KFL_000010610
Peptidase S41 family protein.
   
 0.772
KFL_000360400
Helicase.
   
 0.772
KFL_002210070
SPFH or Band 7 or PHB domain-containing membrane-associated protein family.
   
 0.772
KFL_002380140
PHB domain-containing protein.
   
 0.772
KFL_000300020
Uncharacterized protein.
   
 0.721
KFL_002520030
PHB domain-containing protein.
   
 0.721
KFL_002700230
Prohibitin.
   
 0.721
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.