STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_003710050Uncharacterized protein. (1689 aa)    
Predicted Functional Partners:
KFL_000490340
Putative Y-family DNA polymerase.
    
 0.951
KFL_006720020
Structural maintenance of chromosomes protein.
   
 0.908
KFL_005770060
Structural maintenance of chromosomes protein.
   
 0.907
KFL_001350180
WAPL (Wings apart-like protein regulation of heterochromatin) protein.
   
 0.886
KFL_002870040
Sister chromatid cohesion complex Cohesin subunit RAD21/SCC1.
   
 0.882
KFL_009770020
Sister chromatid cohesion protein.
   
 0.862
KFL_000660260
Structural maintenance of chromosome protein SMC5/Spr18.
   
 0.776
KFL_002960020
Uncharacterized protein.
    
 0.765
KFL_006080090
DNA repair protein RAD18.
   
 0.755
KFL_004110100
Structural maintenance of chromosomes protein.
   
 0.728
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.