STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_005300040Ubiquitin-like protein. (73 aa)    
Predicted Functional Partners:
KFL_001830130
SART-1 family protein.
    
 0.990
KFL_008320030
MFAP1 domain-containing protein.
    
 0.974
KFL_004610140
Putaive Pre-mRNA-processing-splicing factor.
    
 
 0.972
KFL_001290100
Pre-mRNA-splicing factor 38A.
    
 0.970
KFL_003330050
U4/U6.U5 tri-snRNP component SNU23.
    
 0.916
KFL_006250060
Component of the U4/U6.U5 snRNP/mitosis protein DIM1.
   
  0.913
KFL_001330190
Cell division control protein.
    
  0.909
KFL_002280010
Small nuclear ribonucleoprotein G.
   
   0.898
KFL_000670020
Small nuclear ribonucleoprotein Sm D2.
   
   0.878
KFL_000640240
Splicing factor subunit; Belongs to the SF3B5 family.
   
   0.878
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.