STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_00574006050S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (105 aa)    
Predicted Functional Partners:
KFL_002400110
Chloroplast ribosomal protein L15; Belongs to the universal ribosomal protein uL15 family.
   
   0.871
rpl33
50S ribosomal protein L33, chloroplastic.
    
   0.857
KFL_002950100
Prohibitin.
   
 0.804
KFL_006030090
Chloroplast ribosomal protein L9.
  
 
 0.790
KFL_006900100
Chloroplast ribosomal protein L28.
   
 
 0.778
KFL_000770230
Chloroplast ribosomal protein S6.
   
 
 0.776
KFL_002870170
Chloroplast ribosomal protein L27.
  
 
 0.773
KFL_001340120
Chloroplast ribosomal protein L29.
   
 
 0.760
KFL_000930180
Chloroplast ribosomal protein S20.
   
 
 0.758
KFL_003720120
Chloroplast ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.748
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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