STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_003900070Uncharacterized protein. (173 aa)    
Predicted Functional Partners:
KFL_000330060
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
   0.868
KFL_000190370
RECA_2 domain-containing protein.
    
 
 0.657
KFL_000450050
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family.
    
 
 0.549
KFL_000760030
DNA-repair protein XRCC3.
    
 
 0.540
KFL_001840190
UDP-galactose transporter related protein.
   
 
 0.515
KFL_001410225
Uncharacterized protein.
      
 0.505
KFL_001320110
Uncharacterized protein.
    
 
 0.499
KFL_000620010
P-loop containing nucleoside triphosphate hydrolases superfamily protein.
    
 
 0.485
KFL_001480150
ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...]
    
 
 0.485
KFL_000550180
Uncharacterized protein.
    
 
 0.473
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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