STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_006440020Tesmin/TSO1-like CXC domain containing protein. (1829 aa)    
Predicted Functional Partners:
KFL_000120020
Uncharacterized protein.
   
 0.912
KFL_003020130
Retinoblastoma-related protein.
   
 0.850
KFL_000190230
Transcription factor DP.
   
 0.834
KFL_008430030
Transcription factor E2F/dimerization partner.
   
 0.827
KFL_000550050
Uncharacterized protein.
   
 0.812
KFL_000370400
Nucleosome assembly factor.
   
 0.800
KFL_002090210
WD_REPEATS_REGION domain-containing protein.
   
 0.800
KFL_005230070
Nucleosome remodeling factor subunit CAF1/NURF55/MSI1.
   
 0.800
KFL_009950020
WD_REPEATS_REGION domain-containing protein.
   
 0.800
KFL_000400130
Myb superfamily transcription factor.
    
 0.554
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.