STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_004280070RWD domain-containing protein. (248 aa)    
Predicted Functional Partners:
KFL_009250040
GTP-binding protein DRG2 (ODN superfamily).
   
 
 0.988
KFL_005020030
GTP-binding protein (ODN superfamily).
   
 
 0.941
KFL_000120430
ABC transporter.
   
 
 0.761
KFL_004120040
ATPase component of ABC transporters with duplicated ATPase domain.
   
 
 0.761
KFL_002350090
Zinc finger (CCCH-type) family protein.
   
 
 0.702
KFL_007420030
Protein kinase-like domain containing protein.
    
   0.697
KFL_010000010
Protein kinase superfamily protein.
    
   0.697
KFL_003030030
NUC153 domain-containing protein.
   
   0.571
KFL_000180330
Protein ILITYHIA.
    
 
 0.533
KFL_007070030
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
  
 0.478
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.