STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_004380070DUF262 domain-containing protein. (1242 aa)    
Predicted Functional Partners:
KFL_001600180
MIF4G domain-containing protein / MA3 domain-containing protein.
    
 0.966
KFL_003750110
Pre-mRNA-processing factor 17.
   
 0.965
KFL_000050190
Pre-mRNA-splicing factor SYF2.
    
 0.961
KFL_002020130
Cir_N domain-containing protein.
   
 0.961
KFL_003160150
ATP-dependent RNA helicase.
    
 0.958
KFL_002280030
Uncharacterized protein.
   
 0.956
KFL_005650010
Small nuclear ribonucleoprotein F.
    
 0.953
KFL_000610120
Pre-mRNA-splicing factor.
    
 0.950
KFL_002280010
Small nuclear ribonucleoprotein G.
    
 0.948
KFL_000670020
Small nuclear ribonucleoprotein Sm D2.
    
 0.947
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.