STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_006020010Biotin synthase. (454 aa)    
Predicted Functional Partners:
KFL_003440040
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
 
 
 0.977
KFL_003730150
Putative biotin holocarboxylase synthetase/biotin-protein ligase.
  
 
 0.934
KFL_002220210
Ornithine aminotransferase.
 
 
 
 0.897
KFL_002830070
Lysine-ketoglutarate reductase.
   
 
  0.801
KFL_000300380
7-keto-8-aminopelargonic acid synthase.
  
 
 0.796
KFL_006400040
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
 0.796
KFL_000720240
Multifunctional pyrimidine synthesis protein CAD.
  
 
 0.740
KFL_001240110
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.740
KFL_007220070
Carbamoyl phosphate synthetase B.
  
 
 0.740
KFL_003300030
2-amino-3-ketobutyrate coenzyme A ligase.
 
 
 0.728
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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