STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_004630030Tubby-like protein; Belongs to the TUB family. (552 aa)    
Predicted Functional Partners:
KFL_005540050
Intraflagellar transport protein 122.
    
 0.727
KFL_000880240
Uncharacterized protein.
    
 0.722
KFL_000670380
Flagellar associated protein.
    
 0.709
KFL_000050465
Uncharacterized protein.
    
 0.679
KFL_000050460
WD_REPEATS_REGION domain-containing protein.
    
 0.679
KFL_000010210
Calcium channel-related.
    
  0.471
KFL_000970180
Uncharacterized protein.
    
  0.471
KFL_000120290
CALCIUM CHANNEL-RELATED.
    
  0.471
KFL_001100290
Uncharacterized protein.
    
  0.471
KFL_001400170
T-type voltage-gated Ca2+ channel.
    
  0.471
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.