STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_005290060ABC Acyl Transporter. (1367 aa)    
Predicted Functional Partners:
KFL_000570390
Peroxin 19 family protein.
    
 0.806
KFL_000830070
Peroxin 3.
   
 0.729
KFL_001870040
Peroxisomal membrane protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.706
KFL_001320070
LMBR1 domain-containing protein 1.
    
 0.697
KFL_000310120
DUF4097 domain-containing protein.
   
 0.665
KFL_000670040
Pex14_N domain-containing protein.
   
 0.665
KFL_001500180
Peroxisomal membrane protein PEX16.
     
 0.661
KFL_004690030
Peroxin 12.
   
 
 0.655
KFL_000120580
Peroxin 11 family protein.
   
 
 0.630
KFL_000380110
Peroxin 11 family protein.
   
 
 0.630
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.