STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_004910050Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
KFL_000670110
ARP protein.
    
  0.454
KFL_003190160
Glucosylceramide Synthase (UDP-glucose-dependent).
   
 
 0.429
KFL_000740150
UDP-glucose 6-dehydrogenase.
     
 0.428
KFL_004990050
Ceramide kinase.
    
 0.414
KFL_000270160
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.406
KFL_008960040
Uncharacterized protein.
    
  0.406
KFL_002200120
Uncharacterized protein.
     
 0.404
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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