STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_007440030Uncharacterized protein. (1736 aa)    
Predicted Functional Partners:
KFL_001240260
Chloroplast ribosomal protein S10 precurcer.
   
   0.482
KFL_000540210
S1 RNA binding domain containing protein.
   
   0.468
KFL_000830030
Mitochondrial or chloroplast ribosomal protein L5.
   
   0.461
KFL_001600190
Chloroplast ribosomal protein L4.
   
   0.458
KFL_000770230
Chloroplast ribosomal protein S6.
   
   0.455
KFL_000930180
Chloroplast ribosomal protein S20.
   
   0.455
KFL_003310160
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
   0.455
KFL_001880090
Chloroplast ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.446
KFL_000320150
Chloroplast ribosome releasing factor RRF.
   
 
 0.444
KFL_002550080
Chloroplast ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.444
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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