STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_007960050Peptidase m16 domain protein; Belongs to the peptidase M16 family. (649 aa)    
Predicted Functional Partners:
KFL_008880030
Cytochrome c1.
   
 0.994
KFL_000080520
Ubiquinol-cytochrome c reductase subunit 7.
   
 0.990
KFL_000930200
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.986
KFL_001400110
Cytochrome c oxidase subunit 5b.
   
 0.985
KFL_002630010
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
 0.982
KFL_009870040
NAD(P)-binding Rossmann-fold superfamily protein.
   
 0.982
KFL_002200090
Ubiquinol-cytochrome c reductase subunit 9.
   
 0.977
KFL_000230020
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.967
KFL_000750260
Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.
   
 0.955
KFL_005460030
Mitochondrial processing peptidase alpha subunit; Belongs to the peptidase M16 family.
   
 0.955
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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