STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_005140110Putative retrotransposon protein. (523 aa)    
Predicted Functional Partners:
KFL_015370020
Uncharacterized protein.
 
     0.931
KFL_000640340
Uncharacterized protein.
 
     0.927
KFL_001420215
Uncharacterized protein.
 
     0.902
KFL_007540020
Putative retrotransposon protein.
 
     0.889
KFL_014220020
Putative retrotransposon protein.
 
     0.795
KFL_008720020
RT_RNaseH_2 domain-containing protein.
 
     0.728
KFL_011180020
Putative retrotransposon protein.
 
     0.724
KFL_007470020
Putative retrotransposon protein.
 
     0.709
KFL_013780010
Integrase catalytic domain-containing protein.
 
     0.635
KFL_001930205
Reverse transcriptase domain-containing protein.
 
     0.611
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.