STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_007090080O-Glycosyl hydrolases family 17 protein; Belongs to the glycosyl hydrolase 17 family. (642 aa)    
Predicted Functional Partners:
KFL_001000010
Putative chromatin remodeling factor subunit and related transcription factors.
    
 0.816
KFL_007050030
SWIB/MDM2 domain superfamily protein.
    
 0.814
KFL_006030040
Actin-related protein 4-ARP4; Belongs to the actin family.
    
 0.814
KFL_001410140
Uncharacterized protein.
    
 0.720
KFL_000500090
Uncharacterized protein.
    
 0.720
KFL_011820010
HMG (High mobility group) box protein.
   
 
 0.716
KFL_002510020
ARM repeat superfamily protein.
    
 0.695
KFL_001810160
Uncharacterized protein.
    
 0.695
KFL_003940030
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.680
KFL_012390020
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.629
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.