STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_005270090SNARE domain containing protein; Belongs to the syntaxin family. (266 aa)    
Predicted Functional Partners:
KFL_001120110
Xylulose kinase.
  
 
 0.846
KFL_000060860
Uncharacterized protein.
  
 0.791
KFL_000300380
7-keto-8-aminopelargonic acid synthase.
  
 
 0.782
KFL_000880130
Long-Chain Base 1.
  
 
 0.782
KFL_001140240
Long-Chain Base 1.
  
 
 0.782
KFL_003300030
2-amino-3-ketobutyrate coenzyme A ligase.
  
 
 0.782
KFL_001090020
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.770
KFL_000400230
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
  
 0.736
KFL_001250270
Ketose-bisphosphate aldolase class-II family protein.
  
 
 0.735
KFL_001250130
GMP synthase.
    
  0.718
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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