STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_008950020Zeaxanthin epoxidase. (685 aa)    
Predicted Functional Partners:
KFL_002570100
Lycopene beta cyclase.
   
 
 0.903
KFL_000280200
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 0.897
KFL_006040070
Violaxanthin de-epoxidase.
     
 0.895
KFL_005150050
Beta-carotene hydroxylase; Belongs to the sterol desaturase family.
     
 0.879
KFL_000190320
Phytoene synthase.
   
 
 0.802
KFL_001940090
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. Belongs to the kynureninase family.
  
 
 0.749
KFL_001880250
Cytochrome p450.
   
 0.708
KFL_000860020
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.697
KFL_008740020
Magnesium protoporphyrin IX S-adenosyl methionine O-methyl transferase.
   
 0.689
KFL_005730080
Methyltranfer_dom domain-containing protein.
   
 0.677
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.