STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_005780050Guanosine polyphosphate pyrophosphohydrolase/synthase. (900 aa)    
Predicted Functional Partners:
KFL_000080510
Ribosomal protein S6 family protein.
   
 
 0.799
KFL_004650030
60S ribosomal protein L5.
    
 
 0.790
KFL_001360250
Pentatricopeptide repeat domain containing protein.
    
   0.788
KFL_001600050
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.788
KFL_003310160
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.788
KFL_003600040
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
    
   0.788
KFL_003800050
60S ribosomal protein L7 family protein.
    
   0.788
KFL_003070150
Thioredoxin domain-containing protein.
   
 0.768
KFL_000010620
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
  0.751
KFL_008590050
Mitochondrial or chloroplast ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
    
  0.751
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
Server load: low (14%) [HD]