STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_00737001040S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (195 aa)    
Predicted Functional Partners:
KFL_000080510
Ribosomal protein S6 family protein.
  
 0.995
KFL_000350260
40S ribosomal protein S19.
   
 0.995
KFL_000530450
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.995
KFL_001220060
60S ribosomal protein L7A family protein.
  
 0.995
KFL_001600050
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.995
KFL_002370050
40S ribosomal protein S28.
   
 0.995
KFL_004610050
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.995
KFL_003470040
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
 
 
 0.995
KFL_000380080
40S ribosomal protein S17.
   
 0.994
KFL_000550160
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.994
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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