STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_008930050Lipocalin; Belongs to the calycin superfamily. Lipocalin family. (337 aa)    
Predicted Functional Partners:
KFL_004640090
VASt domain-containing protein.
   
 
 0.571
KFL_000570130
TR_THY domain-containing protein.
  
 
 0.560
KFL_005900040
Putative SNF2 family N-terminal domain containing protein.
     
 0.513
KFL_010030030
Lipocalin protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.483
KFL_000480450
Protein translocase subunit SecA; Belongs to the SecA family.
     
 0.475
KFL_002120020
Protein translocase subunit SecA; Belongs to the SecA family.
     
 0.475
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.