STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_008960030Uncharacterized protein. (634 aa)    
Predicted Functional Partners:
KFL_000930200
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
    0.783
KFL_000980320
tRNAse Z4.
   
   0.632
KFL_001140090
Uncharacterized protein.
   
   0.632
KFL_001250030
Lactamase_B domain-containing protein.
   
   0.632
KFL_002820100
Lactamase_B domain-containing protein.
   
   0.632
KFL_000570300
tRNAse Z1.
   
   0.624
KFL_000830130
Uncharacterized protein.
  
     0.529
KFL_000210330
Ubiquitin-conjugating enzyme family protein.
    
 
 0.502
KFL_001260140
Ubiquitin conjugating enzyme family protein.
    
 
 0.502
KFL_002090040
Ubiquitin-conjugating enzyme E2-like protein.
    
 
 0.502
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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