STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_008990010DBP10CT domain-containing protein. (214 aa)    
Predicted Functional Partners:
KFL_001360090
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  0.967
KFL_003630120
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.948
KFL_009860030
Sas10/Utp3/C1D family protein.
   
  0.944
KFL_001030030
Uncharacterized protein.
   
 0.937
KFL_001060260
Uncharacterized protein.
   
 
 0.932
KFL_000740060
Brix domain-containing protein.
   
   0.930
KFL_000070390
WD40 repeat-like superfamily protein.
   
  0.929
KFL_008690020
RRM domain-containing protein.
   
 
 0.922
KFL_003770020
DNA polymerase V.
   
  0.918
KFL_002410110
U3 small nucleolar RNA-associated protein 22.
   
 0.917
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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