STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_009470020Essential for mitotic growth 1. (239 aa)    
Predicted Functional Partners:
KFL_000540200
CBF domain-containing protein.
   
 0.999
KFL_001030030
Uncharacterized protein.
   
 0.999
KFL_003460050
U3 small nucleolar RNA-associated protein 24.
   
 0.999
KFL_003990030
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
KFL_006360020
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
  
 0.999
KFL_000040540
S1 RNA binding domain containing protein.
   
 0.998
KFL_000070390
WD40 repeat-like superfamily protein.
   
 0.998
KFL_004370020
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.998
KFL_009860030
Sas10/Utp3/C1D family protein.
   
 0.998
KFL_000530450
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.997
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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