STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_009520010Uncharacterized protein. (624 aa)    
Predicted Functional Partners:
KFL_011820010
HMG (High mobility group) box protein.
    
 
 0.630
KFL_001440120
Ubiquitin/40S ribosomal protein S27a fusion.
    
  0.510
KFL_000310310
Protection of telomeres 1 protein.
    
  0.490
KFL_005900040
Putative SNF2 family N-terminal domain containing protein.
    
 0.474
KFL_002850110
Protein kinase ATM/Tel1; Belongs to the PI3/PI4-kinase family.
    
  0.469
KFL_001570230
Uncharacterized protein.
    
  0.460
KFL_000260500
Uncharacterized protein.
    
  0.460
KFL_000260490
Uncharacterized protein.
    
  0.460
KFL_004600090
Kazal-like domain-containing protein.
    
  0.460
KFL_006120010
Uncharacterized protein.
    
 0.448
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.