STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_009540040Putative Xaa-Pro aminopeptidase. (323 aa)    
Predicted Functional Partners:
KFL_009540030
Putative Xaa-Pro aminopeptidase 3.
 
     0.946
KFL_000850110
UDP-N-acetylmuramate:NADP+ oxidoreductase.
    
  0.713
KFL_001910070
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.695
KFL_003250090
Glycine cleavage T-protein family.
  
 0.695
KFL_003230030
Uncharacterized protein.
  
 0.695
KFL_001180250
Shikimate kinase.
    
  0.643
KFL_003860040
Thioredoxin reductase.
    
 0.642
KFL_000190030
DAO domain-containing protein.
  
 
 0.635
KFL_000800100
DAO domain-containing protein.
  
 
 0.635
KFL_002050130
Rieske domain-containing protein.
  
 
 0.635
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.