STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_007340080Uncharacterized protein. (515 aa)    
Predicted Functional Partners:
KFL_008910050
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.890
KFL_005900040
Putative SNF2 family N-terminal domain containing protein.
    
 0.786
KFL_011820010
HMG (High mobility group) box protein.
    
 0.776
rps2
30S ribosomal protein S2, chloroplastic.
   
  0.703
KFL_000080510
Ribosomal protein S6 family protein.
    
  0.700
KFL_001660115
MRP-S28 domain-containing protein.
    
  0.698
KFL_001940070
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
  0.695
KFL_005340020
Putative Transcription factor IIIC subunit 5.
    
 0.694
KFL_001170140
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.677
KFL_002200130
Uncharacterized protein.
    
 0.670
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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