STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL_008420030Phospholipase A2-activating protein. (793 aa)    
Predicted Functional Partners:
KFL_001580090
Nuclear pore localisation protein NPL4.
   
 
 0.974
KFL_000870100
OTU-like cysteine protease.
    
 
 0.970
KFL_004680030
Ubiquitin fusion degradation UFD1 family protein.
   
 
 0.928
KFL_009600050
Ubiquitin fusion degradation UFD1 family protein.
   
 
 0.928
KFL_000970310
UBX domain-containing protein 1.
    
 
 0.898
KFL_002000170
SEP domain-containing protein.
    
 
 0.898
KFL_003130100
Uncharacterized protein.
    
 
 0.898
KFL_001440120
Ubiquitin/40S ribosomal protein S27a fusion.
    
 0.879
KFL_003450130
60S ribosomal protein L40.
    
   0.857
KFL_001040360
UBX domain-containing protein.
   
 
 0.852
Your Current Organism:
Klebsormidium nitens
NCBI taxonomy Id: 105231
Other names: K. nitens, Klebsormidium nitens (Meneghini) Lokhorst
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