STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GYO_2200Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. (2611 aa)    
Predicted Functional Partners:
GYO_0564
Putative surfactin synthethase subunit 3 SrfAC.
 
 
0.999
GYO_2073
KR domain family.
 
 
0.999
GYO_2076
KR domain family; Overlaps another CDS with the same product name.
 
 
0.999
GYO_2202
Aminotransferase, class III family.
 
 
0.999
GYO_3487
Amino acid adenylation domain protein.
 
 
0.999
GYO_0563
Putative surfactin synthethase subunit 2 SrfAB.
 
 
0.998
GYO_2075
KR domain family; Overlaps another CDS with the same product name.
 
 0.998
GYO_2077
Methyltransferase domain family.
 
 
 0.996
GYO_3486
Conserved domain protein.
 
 
 0.995
srfAD
Surfactin synthetase thioesterase subunit SrfAD.
 
  
 0.991
Your Current Organism:
Bacillus subtilis spizizenii
NCBI taxonomy Id: 1052585
Other names: B. subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii str. TU-B-10, Bacillus subtilis subsp. spizizenii strain TU-B-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.