STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380705_00251Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000380705_00192
Unannotated protein.
    
  0.806
GCA_000380705_00726
Unannotated protein.
  
 
 0.780
GCA_000380705_00252
Unannotated protein.
       0.773
GCA_000380705_01095
Unannotated protein.
    
 
 0.765
GCA_000380705_00123
Unannotated protein.
    
 0.752
GCA_000380705_00594
Unannotated protein.
    
  0.741
GCA_000380705_00435
Unannotated protein.
    
  0.740
GCA_000380705_00175
Unannotated protein.
  
 
 0.726
GCA_000380705_01084
Unannotated protein.
    
   0.726
GCA_000380705_01372
Unannotated protein.
   
   0.722
Your Current Organism:
Crenarchaeota archaeon SCGC AAA471B05
NCBI taxonomy Id: 1052801
Other names: C. archaeon SCGC AAA471-B05, Crenarchaeota archaeon SCGC AAA471-B05, candidate division YNPFFA archaeon SCGC AAA471-B05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.