STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380705_01022Unannotated protein. (214 aa)    
Predicted Functional Partners:
GCA_000380705_01020
Unannotated protein.
 
  
 0.990
GCA_000380705_01023
Unannotated protein.
 
   
 0.967
GCA_000380705_01021
Unannotated protein.
 
     0.800
GCA_000380705_01024
Unannotated protein.
       0.773
GCA_000380705_01252
Unannotated protein.
 
   
 0.713
GCA_000380705_01224
Unannotated protein.
 
     0.679
GCA_000380705_01253
Unannotated protein.
 
   
 0.640
GCA_000380705_00573
Unannotated protein.
 
   
 0.569
GCA_000380705_01019
Unannotated protein.
       0.562
GCA_000380705_00588
Unannotated protein.
 
   
 0.520
Your Current Organism:
Crenarchaeota archaeon SCGC AAA471B05
NCBI taxonomy Id: 1052801
Other names: C. archaeon SCGC AAA471-B05, Crenarchaeota archaeon SCGC AAA471-B05, candidate division YNPFFA archaeon SCGC AAA471-B05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.