STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380705_01150Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_000380705_00042
Unannotated protein.
  
  
  0.587
GCA_000380705_01151
Unannotated protein.
       0.560
GCA_000380705_00341
Unannotated protein.
  
 
  0.551
GCA_000380705_00181
Unannotated protein.
    
 0.541
GCA_000380705_00966
Unannotated protein.
    
 0.541
GCA_000380705_00122
Unannotated protein.
  
     0.531
GCA_000380705_01152
Unannotated protein.
       0.474
GCA_000380705_00542
Unannotated protein.
 
  
  0.423
GCA_000380705_01153
Unannotated protein.
       0.416
GCA_000380705_01154
Unannotated protein.
       0.416
Your Current Organism:
Crenarchaeota archaeon SCGC AAA471B05
NCBI taxonomy Id: 1052801
Other names: C. archaeon SCGC AAA471-B05, Crenarchaeota archaeon SCGC AAA471-B05, candidate division YNPFFA archaeon SCGC AAA471-B05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.